5 years 8 months ago
Members of the heterogeneous nuclear ribonucleoprotein (hnRNP) F/H family are multipurpose RNA binding proteins that participate in most stages of RNA metabolism. Despite having similar RNA sequence preferences, hnRNP F/H proteins function in overlapping and, in some cases, distinct cellular processes. The domain organization of hnRNP F/H proteins is modular, consisting of N-terminal tandem quasi-RNA recognition motifs (F/HqRRM1,2) and a third C-terminal qRRM3 embedded between glycine-rich...
Srinivasa R Penumutchu
5 years 10 months ago
The Na^(+)/Ca^(2+) exchanger (NCX) is a ubiquitous single-chain membrane protein that plays a major role in regulating the intracellular Ca^(2+) homeostasis by the counter transport of Na^(+) and Ca^(2+) across the cell membrane. Other than its prokaryotic counterpart, which contains only the transmembrane domain and is self-sufficient as an active ion transporter, the eukaryotic NCX protein possesses in addition a large intracellular loop that senses intracellular calcium signals and controls...
Jiaqi Yuan
5 years 10 months ago
The Na^(+)/Ca^(2+) exchanger (NCX) is a ubiquitous single-chain membrane protein that plays a major role in regulating the intracellular Ca^(2+) homeostasis by the counter transport of Na^(+) and Ca^(2+) across the cell membrane. Other than its prokaryotic counterpart, which contains only the transmembrane domain and is self-sufficient as an active ion transporter, the eukaryotic NCX protein possesses in addition a large intracellular loop that senses intracellular calcium signals and controls...
Jiaqi Yuan
5 years 10 months ago
Er-23 is a small, 51 amino acid, disulfide-rich pheromone protein used for cell signaling by Euplotes raikovi. Ten of the 51 amino acids are cysteine, allowing up to five disulfide bonds. Previous NMR work with Er-23 utilized homologously expressed protein, prohibiting isotopic labeling, and consequently the chemical shift assignments were incomplete. We have expressed uniformly ^(15)N and ^(13)C-labeled Er-23 in an E. coli expression system. Here we report the full backbone and side chain...
David P Bowles
5 years 10 months ago
Er-23 is a small, 51 amino acid, disulfide-rich pheromone protein used for cell signaling by Euplotes raikovi. Ten of the 51 amino acids are cysteine, allowing up to five disulfide bonds. Previous NMR work with Er-23 utilized homologously expressed protein, prohibiting isotopic labeling, and consequently the chemical shift assignments were incomplete. We have expressed uniformly ^(15)N and ^(13)C-labeled Er-23 in an E. coli expression system. Here we report the full backbone and side chain...
David P Bowles
5 years 11 months ago
CONCLUSION: ADC histogram analysis shows potential in discriminating progressive from non-progressive disease in patients with mCRC, who underwent whole-body DW-MRI. The technique can potentially be tested as a response assessment methodology in larger trials.
I Lavdas
6 years ago
Prof. Lars Konnerman, The University of Western Ontario, London “From Solution into the Gas Phase: A Look at Electrosprayed Protein Ions and ESI Mechanisms” Date: April 23rd Time: 5:30PM Location: TBA
hall.1443
6 years 1 month ago
Prof. Laura Reed, University of Alabama, Tuscaloosa “Disentangling the gene-by-environment interaction architecture of metabolic disease through the lens of evolutionary genetics and metabolomics” Date: March 29th Time: 5:30PM Location: TBA
hall.1443
6 years 1 month ago
Many biomolecular NMR applications can benefit from the faster acquisition of multidimensional NMR data with high resolution and their automated analysis and interpretation. In recent years, a number of non-uniform sampling (NUS) approaches have been introduced for the reconstruction of multidimensional NMR spectra, such as compressed sensing, thereby bypassing traditional Fourier-transform processing. Such approaches are applicable to both biomacromolecules and small molecules and their complex...
Dawei Li
6 years 1 month ago
Many biomolecular NMR applications can benefit from the faster acquisition of multidimensional NMR data with high resolution and their automated analysis and interpretation. In recent years, a number of non-uniform sampling (NUS) approaches have been introduced for the reconstruction of multidimensional NMR spectra, such as compressed sensing, thereby bypassing traditional Fourier-transform processing. Such approaches are applicable to both biomacromolecules and small molecules and their complex...
Dawei Li
6 years 1 month ago
Understanding and harnessing the interactions between nanoparticles and biological molecules is at the forefront of applications of nanotechnology to modern biology. Metabolomics has emerged as a prominent player in systems biology as a complement to genomics, transcriptomics and proteomics. Its focus is the systematic study of metabolite identities and concentration changes in living systems. Despite significant progress over the recent past, important challenges in metabolomics remain, such as...
Bo Zhang
6 years 1 month ago
Understanding and harnessing the interactions between nanoparticles and biological molecules is at the forefront of applications of nanotechnology to modern biology. Metabolomics has emerged as a prominent player in systems biology as a complement to genomics, transcriptomics and proteomics. Its focus is the systematic study of metabolite identities and concentration changes in living systems. Despite significant progress over the recent past, important challenges in metabolomics remain, such as...
Bo Zhang
6 years 2 months ago
Mr. William Andrews, Hummon Research Group, Ohio State “Enhancing Mass Spectrometric Molecular Imaging Through Active Analyte Extraction” Ms. Sierra Jackson, Badu Research Group, Ohio State “Thread Spray Mass Spectrometry for Direct Analysis of Capsaicinoids in Pepper Products” Date: February 20th Time: 5:30PM Location: TBA
hall.1443
6 years 3 months ago
Mrs. Bernice Agana, Wysocki Research Group, Ohio State “Multi-omics Profiling of LKB1 Mutant NSCLC Cells to Characterize Deregulated Pathways Contributing to Tumorigenesis” Mr. Dmytro Kulyk, Badu Research Group, Ohio State “Multi-mode Nano-Contained Ion Source Capable of ESI and APCI” Date: January 23rd Time: 5:30PM Location: TBA
hall.1443
6 years 5 months ago
Hepatocellular carcinoma (HCC) is the most prevalent and highly aggressive liver malignancy with limited therapeutic options. Here, the therapeutic potential of zerumbone, a sesquiterpene derived from the ginger plant Zingiber zerumbet, against HCC was explored. Zerumbone inhibited proliferation and clonogenic survival of HCC cells in a dose-dependent manner by arresting cells at the G(2)-M phase and inducing apoptosis. To elucidate the underlying molecular mechanisms, a phosphokinase array was...
Nissar Ahmad Wani
6 years 5 months ago
Hepatocellular carcinoma (HCC) is the most prevalent and highly aggressive liver malignancy with limited therapeutic options. Here, the therapeutic potential of zerumbone, a sesquiterpene derived from the ginger plant Zingiber zerumbet, against HCC was explored. Zerumbone inhibited proliferation and clonogenic survival of HCC cells in a dose-dependent manner by arresting cells at the G(2)-M phase and inducing apoptosis. To elucidate the underlying molecular mechanisms, a phosphokinase array was...
Nissar Ahmad Wani
6 years 7 months ago
Bioassay-guided phytochemical investigation of a commercially available maqui berry (Aristotelia chilensis) extract used in botanical dietary supplement products led to the isolation of 16 compounds, including one phenolic molecule, 1, discovered for the first time from a natural source, along with several known compounds, 2-16, including three substances not reported previously in A. chilensis, 2, 14, and 15. Each isolate was characterized by detailed analysis of NMR spectroscopic and HRESIMS...
Jie Li
6 years 7 months ago
Bioassay-guided phytochemical investigation of a commercially available maqui berry (Aristotelia chilensis) extract used in botanical dietary supplement products led to the isolation of 16 compounds, including one phenolic molecule, 1, discovered for the first time from a natural source, along with several known compounds, 2-16, including three substances not reported previously in A. chilensis, 2, 14, and 15. Each isolate was characterized by detailed analysis of NMR spectroscopic and HRESIMS...
Jie Li
6 years 9 months ago
CONCLUSIONS: Three state-of-the-art algorithms were developed and used to automatically segment major organs and bones in whole body MRI; good agreement to manual segmentations performed by clinical MRI experts was observed. CNNs perform favorably, when using T2w volumes as input. Using multimodal MRI data as input to CNNs did not improve the segmentation performance.
Ioannis Lavdas
6 years 10 months ago
CONCLUSION: WB-MRI derived focal lesion sFF shows promise as an imaging biomarker of treatment response in newly diagnosed MM.
Arash Latifoltojar